Description of analysis

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RLSeq was run on default settings with R-loop mapping data uploaded to RLBase. Briefly, the uploaded file was read into R and converted to an RLRanges object. Then, the core RLSeq pipeline was executed with the RLSeq::RLSeq() function. The resulting RLRanges object, now containing all available results, was then saved and uploaded to an AWS S3 bucket. Finally, the RLRanges object was passed to the RLSeq::report() function to generate an HTML report. The report was also uploaded to an AWS S3 bucket along with all log files.

NOTE: Due to size limitations, we are unable to provide the ability to analyze correlations as this requires submitting bigWig files. To learn more, check out the RLSeq R package.

If you find any errors or issues, please contact the package maintainer (RLBase repo).

User data upload

Status: Done

Run RLSeq

Status: Done

Upload results

Status: Done